openchemlib-utils
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    Function getConnectivityMatrix

    • Returns a connectivity matrix

      Parameters

      • molecule: Molecule
      • Optionaloptions: {
            atomicNo?: boolean;
            mass?: boolean;
            negativeAtomicNo?: boolean;
            pathLength?: boolean;
            sdt?: boolean;
            sdta?: boolean;
        } = {}
        • OptionalatomicNo?: boolean

          set the atomic number of the atom on diagonal

        • Optionalmass?: boolean

          set the nominal mass of the atoms on diagonal

        • OptionalnegativeAtomicNo?: boolean

          set the atomic number * -1 of the atom on diagonal

        • OptionalpathLength?: boolean

          get the path length between atoms

        • Optionalsdt?: boolean

          set 1, 2 or 3 depending if single, double or triple bond

        • Optionalsdta?: boolean

          set 1, 2, 3 or 4 depending if single, double, triple or aromatic bond

      Returns any[]